STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93479.1NAD(P)H-dependent flavin oxidoreductase, nitropropane dioxygenase family; Pfam match to PF03060.11 NMO; draft locus tag CAMGR0001_0130. (319 aa)    
Predicted Functional Partners:
fabF
Beta-ketoacyl-[acp] synthase II (KASII); Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.956
fabZ
3-hydroxyacyl-[acp] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
 
 0.915
fabI
Enoyl-[acp] reductase; Pfam match to PF13561.2 adh_short_C2; draft locus tag CAMGR0001_2026.
    
 0.910
AKT93478.1
Flavin reductase (DIM6/NTAB) family protein; Draft locus tag CAMGR0001_0129.
  
    0.589
fabD
malonyl-CoA-[acp] transacylase; Pfam match to PF00698.17 Acyl_transf_1; draft locus tag CAMGR0001_2590.
 
  
 0.558
AKT93477.1
Hypothetical protein; Draft locus tag CAMGR0001_0126.
       0.526
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.476
AKT93480.1
Atypical short-chain dehydrogenase/reductase; Draft locus tag CAMGR0001_0132.
       0.408
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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