STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93487.1RND family efflux transporter, membrane subunit; Pfam match to PF00873.15 ACR_tran; draft locus tag CAMGR0001_0140. (1052 aa)    
Predicted Functional Partners:
AKT93486.1
Multidrug efflux RND transporter, membrane fusion subunit; Pfam match to PF16576.1 HlyD_D23; draft locus tag CAMGR0001_0139; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.999
AKT93488.1
Type I secretion system, outer membrane protein, TolC family; Pfam matches to PF02321.14 OEP, and to PF02321.14 OEP; draft locus tag CAMGR0001_0141.
 0.998
AKT92865.1
TolC-like outer membrane efflux protein; Pfam matches to PF02321.14 OEP, and to PF02321.14 OEP; draft locus tag CAMGR0001_1947.
 
 0.914
macA
Macrolide-specific efflux protein, membrane fusion protein MacA; Pfam match to PF16576.1 HlyD_D23; draft locus tag CAMGR0001_1949; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.893
AKT92584.1
RND family efflux transporter, membrane fusion subunit; Pfam matches to PF13533.2 Biotin_lipoyl_2, and to PF13437.2 HlyD_3; draft locus tag CAMGR0001_0932.
 
   
 0.610
yajC
Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
    
 
 0.572
macB
Macrolide-specific efflux protein, ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 
 0.561
thiD
Hydroxymethylpyrimidine kinase / phosphohydroxymethylpyrimidine kinase; Bifunctional; Pfam matches to PF08543.8 Phos_pyr_kin, and to PF08543.8 Phos_pyr_kin; draft locus tag CAMGR0001_0138.
       0.511
AKT91507.1
Peptidase, M48 family; Pfam match to PF01435.14 Peptidase_M48; draft locus tag CAMGR0001_0313.
  
   
 0.478
AKT93552.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0236.
  
     0.429
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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