STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93512.1ABC transporter, periplasmic substrate-binding protein; Draft locus tag CAMGR0001_0182. (319 aa)    
Predicted Functional Partners:
AKT93511.1
ABC transporter, permease protein; Pfam match to PF00528.18 BPD_transp_1; draft locus tag CAMGR0001_0181.
 
  
 0.990
AKT93510.1
ABC transporter, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_0180.
 
  
 0.987
AKT93509.1
NnrS family protein; Pfam match to PF05940.8 NnrS; draft locus tag CAMGR0001_0179.
  
    0.801
hgpB
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1143.
 
     0.606
AKT93508.1
Cupin domain-containing protein; Pfam match to PF07883.7 Cupin_2; draft locus tag CAMGR0001_0178.
       0.581
AKT92600.1
Putative protein (DUF4198 domain); Pfam match to PF10670.5 DUF4198; draft locus tag CAMGR0001_0905.
  
     0.459
AKT92908.1
Hypothetical protein; Draft locus tag CAMGR0001_1995.
  
  
 0.430
macB
Macrolide-specific efflux protein, ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
   
 0.426
nosZ
Nitrous oxide reductase; Pfam matches to PF13473.2 Cupredoxin_1, and to PF00034.17 Cytochrom_C; draft locus tag CAMGR0001_2187.
  
    0.416
nosD
Copper ABC transporter NosDFY, periplasmic copper-binding protein NosD; Pfam matches to PF05048.9 NosD, and to PF05048.9 NosD; draft locus tag CAMGR0001_2189.
  
     0.414
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.