STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chuAHeme uptake system outer membrane receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0201. (690 aa)    
Predicted Functional Partners:
tonB
Energy transduction protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 
 0.765
AKT92453.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1128.
  
   
 0.541
parA
Chromosome partitioning protein; Pfam match to PF01656.19 CbiA; draft locus tag CAMGR0001_2607.
    
   0.531
AKT93528.1
SAM-dependent methyltransferase; Pfam match to PF08241.8 Methyltransf_11; draft locus tag CAMGR0001_0202.
  
    0.505
AKT93569.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0259.
  
   
 0.505
AKT93486.1
Multidrug efflux RND transporter, membrane fusion subunit; Pfam match to PF16576.1 HlyD_D23; draft locus tag CAMGR0001_0139; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.496
chuD
Heme ABC transporter ChuBCD, periplasmic substrate-binding protein; Pfam match to PF01497.14 Peripla_BP_2; draft locus tags CAMGR0001_2519 and CAMGR0001_2520.
 
  
 0.437
AKT91908.1
Flavodoxin domain protein; Pfam match to PF12641.3 Flavodoxin_3; draft locus tag CAMGR0001_2522.
  
     0.434
AKT93488.1
Type I secretion system, outer membrane protein, TolC family; Pfam matches to PF02321.14 OEP, and to PF02321.14 OEP; draft locus tag CAMGR0001_0141.
  
   
 0.416
yaeT
Beta-barrel assembly machinery complex, BamA/YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
   
 0.412
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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