STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93538.1Putative PAS sensor-containing diguanylate phosphodiesterase; Pfam matches to PF00563.16 EAL, and to PF00989.20 PAS; draft locus tag CAMGR0001_0214. (806 aa)    
Predicted Functional Partners:
AKT91922.1
Two-component system sensor histidine kinase; Pfam matches to PF02518.22 HATPase_c, and to PF00072.20 Response_reg, and to PF00512.21 HisKA, and to PF08376.6 NIT; draft locus tag CAMGR0001_2504.
 
 
 0.995
AKT91821.1
PAS sensor-containing diguanylate cyclase/phosphodiesterase; Pfam matches to PF00990.17 GGDEF, and to PF00563.16 EAL, and to PF13426.2 PAS_9; draft locus tag CAMGR0001_2635.
 
 
0.994
AKT91482.1
Diguanylate cyclase/phosphodiesterase; Pfam matches to PF00563.16 EAL, and to PF00990.17 GGDEF; draft locus tag CAMGR0001_0279.
 
 
 0.988
AKT92022.1
Hypothetical protein; Draft locus tag CAMGR0001_1718.
 
 
 0.897
AKT91923.1
Two-component system response regulator; Pfam match to PF00072.20 Response_reg; draft locus tag CAMGR0001_2503.
  
 
 0.890
AKT93537.1
Cytochrome c peroxidase; Pfam match to PF03150.10 CCP_MauG; draft locus tag CAMGR0001_0213.
       0.803
AKT93536.1
SAM-dependent methyltransferase; Pfam match to PF12847.3 Methyltransf_18; draft locus tag CAMGR0001_0212.
  
  
 0.788
AKT93209.1
Receiver domain protein; Pfam match to PF00072.20 Response_reg; draft locus tag CAMGR0001_0562.
 
 
 0.764
AKT93430.1
Two-component system sensor histidine kinase (DUF3365 domain); Pfam matches to PF11845.4 DUF3365, and to PF02518.22 HATPase_c; draft locus tag CAMGR0001_2232.
 
 
 0.763
AKT91827.1
Pfam matches to PF00072.20 Response_reg, and to PF00486.24 Trans_reg_C; draft locus tag CAMGR0001_2629.
  
 
 0.751
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.