STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93544.1Hypothetical membrane protein (DUF475 domain); Pfam match to PF04332.11 DUF475; draft locus tag CAMGR0001_0225. (336 aa)    
Predicted Functional Partners:
AKT93545.1
Putative histidine transporter; Pfam match to PF03553.10 Na_H_antiporter; draft locus tag CAMGR0001_0226.
       0.547
AKT92172.1
Putative membrane protein; Draft locus tag CAMGR0001_1527.
  
     0.437
queD
6-carboxy-5,6,7,8-tetrahydropterin synthase; Pfam match to PF01242.15 PTPS; draft locus tag CAMGR0001_2667.
  
     0.414
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.