STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93552.1TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0236. (656 aa)    
Predicted Functional Partners:
AKT93569.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0259.
  
  
 0.779
AKT92133.1
Putative TonB-dependent ferric coprogen/ferric rhodotorulic acid receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1580.
  
  
 0.764
tonB
Energy transduction protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.740
AKT93553.1
Putative iron-regulated membrane protein; Pfam match to PF03929.12 PepSY_TM; draft locus tag CAMGR0001_0237.
 
   
 0.733
AKT92453.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1128.
 
  
 0.607
hgpB
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1143.
  
  
 0.584
AKT93486.1
Multidrug efflux RND transporter, membrane fusion subunit; Pfam match to PF16576.1 HlyD_D23; draft locus tag CAMGR0001_0139; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   
 0.573
AKT93551.1
Transcriptional regulator, AraC family; Pfam match to PF12833.3 HTH_18; draft locus tag CAMGR0001_0235.
     
 0.564
AKT92880.1
Alpha/beta hydrolase family protein; Pfam match to PF00756.16 Esterase; draft locus tag CAMGR0001_1963.
 
  
 0.491
AKT93488.1
Type I secretion system, outer membrane protein, TolC family; Pfam matches to PF02321.14 OEP, and to PF02321.14 OEP; draft locus tag CAMGR0001_0141.
  
   
 0.447
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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