Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKT93553.1Putative iron-regulated membrane protein; Pfam match to PF03929.12 PepSY_TM; draft locus tag CAMGR0001_0237. (381 aa)    
Predicted Functional Partners:
modC
Molybdenum ABC transporter ModABC, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_2640.
  
  
 0.833
AKT93569.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0259.
 
  
 0.743
AKT93552.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0236.
 
  
 0.740
AKT92133.1
Putative TonB-dependent ferric coprogen/ferric rhodotorulic acid receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1580.
 
  
 0.720
fdhI
Formate dehydrogenase H, selenocysteine-containing; Pfam matches to PF00384.18 Molybdopterin, and to PF04879.12 Molybdop_Fe4S4; draft locus tags CAMGR0001_1275 and CAMGR0001_1276; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.579
cysK
Cysteine synthase; Pfam match to PF00291.21 PALP; draft locus tag CAMGR0001_0998; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.577
fdhH
Formate dehydrogenase H, selenocysteine-containing; Pfam matches to PF00384.18 Molybdopterin, and to PF01568.17 Molydop_binding; draft locus tags CAMGR0001_2422 and CAMGR0001_2423; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.523
AKT93551.1
Transcriptional regulator, AraC family; Pfam match to PF12833.3 HTH_18; draft locus tag CAMGR0001_0235.
 
     0.512
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
    
  0.508
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
    
   0.481
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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