STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93553.1Putative iron-regulated membrane protein; Pfam match to PF03929.12 PepSY_TM; draft locus tag CAMGR0001_0237. (381 aa)    
Predicted Functional Partners:
modC
Molybdenum ABC transporter ModABC, ATP-binding protein; Pfam match to PF00005.23 ABC_tran; draft locus tag CAMGR0001_2640.
  
  
 0.847
AKT93569.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0259.
 
  
 0.760
AKT92133.1
Putative TonB-dependent ferric coprogen/ferric rhodotorulic acid receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_1580.
 
  
 0.738
AKT93552.1
TonB-dependent receptor; Pfam matches to PF00593.20 TonB_dep_Rec, and to PF07715.11 Plug; draft locus tag CAMGR0001_0236.
 
   
 0.733
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
    
 0.723
AKT93480.1
Atypical short-chain dehydrogenase/reductase; Draft locus tag CAMGR0001_0132.
  
 
   0.688
cysK
Cysteine synthase; Pfam match to PF00291.21 PALP; draft locus tag CAMGR0001_0998; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.595
fdhI
Formate dehydrogenase H, selenocysteine-containing; Pfam matches to PF00384.18 Molybdopterin, and to PF04879.12 Molybdop_Fe4S4; draft locus tags CAMGR0001_1275 and CAMGR0001_1276; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.552
AKT93551.1
Transcriptional regulator, AraC family; Pfam match to PF12833.3 HTH_18; draft locus tag CAMGR0001_0235.
 
     0.512
fdhH
Formate dehydrogenase H, selenocysteine-containing; Pfam matches to PF00384.18 Molybdopterin, and to PF01568.17 Molydop_binding; draft locus tags CAMGR0001_2422 and CAMGR0001_2423; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.492
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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