STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93558.1Transcriptional regulator, TetR family; Pfam match to PF00440.19 TetR_N; draft locus tag CAMGR0001_0245. (207 aa)    
Predicted Functional Partners:
AKT93538.1
Putative PAS sensor-containing diguanylate phosphodiesterase; Pfam matches to PF00563.16 EAL, and to PF00989.20 PAS; draft locus tag CAMGR0001_0214.
  
 
 0.647
macB
Macrolide-specific efflux protein, ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 
 0.624
AKT91482.1
Diguanylate cyclase/phosphodiesterase; Pfam matches to PF00563.16 EAL, and to PF00990.17 GGDEF; draft locus tag CAMGR0001_0279.
  
 
 0.620
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.536
AKT91627.1
Cupin domain-containing protein; Pfam match to PF07883.7 Cupin_2; draft locus tag CAMGR0001_0664.
 
  
 0.527
aas
Bifunctional; Pfam matches to PF00501.24 AMP-binding, and to PF01553.17 Acyltransferase, and to PF07690.12 MFS_1; draft locus tag CAMGR0001_2165.
     
 0.512
AKT93556.1
Putative lipoprotein; Draft locus tag CAMGR0001_0242 and CAMGR0001_0243.
       0.488
AKT93559.1
Pyridine nucleotide-disulfide oxidoreductase; Pfam matches to PF07992.10 Pyr_redox_2, and to PF02852.18 Pyr_redox_dim; draft locus tag CAMGR0001_0247.
  
  
 0.466
AKT93416.1
Putative autotransporter serine protease; Pfam matches to PF00082.18 Peptidase_S8, and to PF03797.15 Autotransporter, and to PF12951.3 Autotrns_rpt; draft locus tag CAMGR0001_2217.
  
 
 0.433
AKT93557.1
Hypothetical protein; Draft locus tag CAMGR0001_0244.
       0.432
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
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