STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT93570.1ABC transporter, ATP-binding/permease protein; Pfam matches to PF06472.11 ABC_membrane_2, and to PF00005.23 ABC_tran, and to PF06472.11 ABC_membrane_2; draft locus tag CAMGR0001_0261. (633 aa)    
Predicted Functional Partners:
aldB
Aldehyde dehydrogenase B; Pfam match to PF00171.18 Aldedh; draft locus tag CAMGR0001_2585; Belongs to the aldehyde dehydrogenase family.
     
 0.777
recA
Recombinase; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
    
   0.512
AKT93493.1
TonB-dependent receptor; Pfam match to PF07715.11 Plug; draft locus tag CAMGR0001_0151.
  
  
 0.503
Your Current Organism:
Campylobacter gracilis
NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738
Server load: low (22%) [HD]