rpsT protein (Campylobacter gracilis) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

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Score

rpsT

30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (90 aa)

Predicted Functional Partners:

rpsO

0.995

rpmE

0.994

rplM

0.994

rplU

0.994

rpmA

0.994

rpsU

0.994

rpmH

0.994

rpmB

0.994

rpsP

0.994

rpmF

0.994

Your Current Organism:

Campylobacter gracilis

NCBI taxonomy Id: 824
Other names: ATCC 33236, Bacteroides gracilis, C. gracilis, CCUG 27720, DSM 19528, JCM 8538, NCTC 12738

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	CGRAC_0363	CGRAC_0370	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.994
rplM	rpmA	CGRAC_0363	CGRAC_0371	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam match to PF01016.15 Ribosomal_L27; draft locus tag CAMGR0001_2614; Belongs to the bacterial ribosomal protein bL27 family.	0.996
rplM	rpmB	CGRAC_0363	CGRAC_1688	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam match to PF00830.15 Ribosomal_L28.	0.993
rplM	rpmE	CGRAC_0363	CGRAC_0336	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L31; Binds the 23S rRNA.	0.994
rplM	rpmF	CGRAC_0363	CGRAC_1840	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L32; Draft locus tag CAMGR0001_0508; Belongs to the bacterial ribosomal protein bL32 family.	0.993
rplM	rpmH	CGRAC_0363	CGRAC_1426	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L34; Draft locus tag CAMGR0001_1945; Belongs to the bacterial ribosomal protein bL34 family.	0.992
rplM	rpsO	CGRAC_0363	CGRAC_0901	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.996
rplM	rpsP	CGRAC_0363	CGRAC_1716	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam match to PF00886.15 Ribosomal_S16; draft locus tag CAMGR0001_2863; Belongs to the bacterial ribosomal protein bS16 family.	0.995
rplM	rpsT	CGRAC_0363	CGRAC_2181	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.994
rplM	rpsU	CGRAC_0363	CGRAC_0502	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S21; Draft locus tag CAMGR0001_1871; Belongs to the bacterial ribosomal protein bS21 family.	0.993
rplU	rplM	CGRAC_0370	CGRAC_0363	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.994
rplU	rpmA	CGRAC_0370	CGRAC_0371	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Pfam match to PF01016.15 Ribosomal_L27; draft locus tag CAMGR0001_2614; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB	CGRAC_0370	CGRAC_1688	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Pfam match to PF00830.15 Ribosomal_L28.	0.994
rplU	rpmE	CGRAC_0370	CGRAC_0336	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L31; Binds the 23S rRNA.	0.994
rplU	rpmF	CGRAC_0370	CGRAC_1840	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L32; Draft locus tag CAMGR0001_0508; Belongs to the bacterial ribosomal protein bL32 family.	0.994
rplU	rpmH	CGRAC_0370	CGRAC_1426	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L34; Draft locus tag CAMGR0001_1945; Belongs to the bacterial ribosomal protein bL34 family.	0.993
rplU	rpsO	CGRAC_0370	CGRAC_0901	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.994
rplU	rpsP	CGRAC_0370	CGRAC_1716	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Pfam match to PF00886.15 Ribosomal_S16; draft locus tag CAMGR0001_2863; Belongs to the bacterial ribosomal protein bS16 family.	0.994
rplU	rpsT	CGRAC_0370	CGRAC_2181	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.994
rplU	rpsU	CGRAC_0370	CGRAC_0502	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S21; Draft locus tag CAMGR0001_1871; Belongs to the bacterial ribosomal protein bS21 family.	0.993