STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000974605_00075Unannotated protein. (555 aa)    
Predicted Functional Partners:
GCA_000974605_00074
Unannotated protein.
 
 
 0.986
GCA_000974605_00073
Unannotated protein.
 
 
 0.958
CYJ10_06170
Unannotated protein.
 
 
 0.943
gspF
Unannotated protein.
 
 
 0.943
CYJ10_06165
Unannotated protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.889
GCA_000974605_01281
Unannotated protein.
 
 
 0.858
gspG
Unannotated protein.
 
 
 0.847
GCA_000974605_05617
Unannotated protein.
  
 
 0.801
GCA_000974605_01279
Unannotated protein.
 
  
 0.718
CYJ10_05340
Unannotated protein.
 
 
 
 0.712
Your Current Organism:
Cupriavidus pauculus
NCBI taxonomy Id: 82633
Other names: ATCC 700817, C. pauculus, CCUG 12507, CDC E6793, CDC group IVc-2, CIP 105943, DSM 17313, JCM 11286, LMG 3244, LMG:3244, Ralstonia paucula, Wautersia paucula
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.