STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
urtCUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (399 aa)    
Predicted Functional Partners:
urtB
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
urtE
Unannotated protein.
 
 0.996
urtD
Unannotated protein.
 
 0.995
urtA
Unannotated protein.
 
 
 0.991
urtA-2
Unannotated protein.
 
  
 0.856
urtB-2
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
     0.824
urtD-2
Unannotated protein.
  
 0.812
ureD
Unannotated protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.797
CYJ10_15185
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.790
CYJ10_32905
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.755
Your Current Organism:
Cupriavidus pauculus
NCBI taxonomy Id: 82633
Other names: ATCC 700817, C. pauculus, CCUG 12507, CDC E6793, CDC group IVc-2, CIP 105943, DSM 17313, JCM 11286, LMG 3244, LMG:3244, Ralstonia paucula, Wautersia paucula
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.