Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYJ10_04370 | CYJ10_04580 | GCA_000974605_03142 | GCA_000974605_03104 | Unannotated protein; Belongs to the P(II) protein family. | Unannotated protein. | 0.475 |
CYJ10_04370 | GCA_000974605_01864 | GCA_000974605_03142 | GCA_000974605_01864 | Unannotated protein; Belongs to the P(II) protein family. | Unannotated protein. | 0.483 |
CYJ10_04370 | guaA | GCA_000974605_03142 | GCA_000974605_02255 | Unannotated protein; Belongs to the P(II) protein family. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.452 |
CYJ10_04370 | nadE | GCA_000974605_03142 | GCA_000974605_03141 | Unannotated protein; Belongs to the P(II) protein family. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.805 |
CYJ10_04370 | purL | GCA_000974605_03142 | GCA_000974605_02916 | Unannotated protein; Belongs to the P(II) protein family. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.597 |
CYJ10_04580 | CYJ10_04370 | GCA_000974605_03104 | GCA_000974605_03142 | Unannotated protein. | Unannotated protein; Belongs to the P(II) protein family. | 0.475 |
CYJ10_04580 | GCA_000974605_01864 | GCA_000974605_03104 | GCA_000974605_01864 | Unannotated protein. | Unannotated protein. | 0.744 |
CYJ10_04580 | guaA | GCA_000974605_03104 | GCA_000974605_02255 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.650 |
CYJ10_04580 | nadE | GCA_000974605_03104 | GCA_000974605_03141 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.758 |
CYJ10_04580 | purL | GCA_000974605_03104 | GCA_000974605_02916 | Unannotated protein. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.618 |
CYJ10_04580 | ribD | GCA_000974605_03104 | GCA_000974605_03862 | Unannotated protein. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.484 |
CYJ10_04580 | rocF | GCA_000974605_03104 | GCA_000974605_03566 | Unannotated protein. | Unannotated protein; Belongs to the arginase family. | 0.436 |
CYJ10_29825 | nadE | GCA_000974605_02901 | GCA_000974605_03141 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.818 |
CYJ10_29825 | pncB | GCA_000974605_02901 | GCA_000974605_02794 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.808 |
GCA_000974605_01864 | CYJ10_04370 | GCA_000974605_01864 | GCA_000974605_03142 | Unannotated protein. | Unannotated protein; Belongs to the P(II) protein family. | 0.483 |
GCA_000974605_01864 | CYJ10_04580 | GCA_000974605_01864 | GCA_000974605_03104 | Unannotated protein. | Unannotated protein. | 0.744 |
GCA_000974605_01864 | guaA | GCA_000974605_01864 | GCA_000974605_02255 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.487 |
GCA_000974605_01864 | nadE | GCA_000974605_01864 | GCA_000974605_03141 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.785 |
GCA_000974605_01864 | purL | GCA_000974605_01864 | GCA_000974605_02916 | Unannotated protein. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.693 |
GCA_000974605_01864 | ribD | GCA_000974605_01864 | GCA_000974605_03862 | Unannotated protein. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.647 |
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