Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYJ10_00650 | CYJ10_01465 | GCA_000974605_02021 | GCA_000974605_00119 | Unannotated protein. | Unannotated protein. | 0.670 |
CYJ10_00650 | fahA | GCA_000974605_02021 | GCA_000974605_04481 | Unannotated protein. | Unannotated protein. | 0.717 |
CYJ10_00650 | hmgA | GCA_000974605_02021 | GCA_000974605_04482 | Unannotated protein. | Unannotated protein; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.936 |
CYJ10_00650 | hppD | GCA_000974605_02021 | GCA_000974605_03619 | Unannotated protein. | Unannotated protein. | 0.921 |
CYJ10_00650 | maiA | GCA_000974605_02021 | GCA_000974605_03467 | Unannotated protein. | Unannotated protein. | 0.710 |
CYJ10_01465 | CYJ10_00650 | GCA_000974605_00119 | GCA_000974605_02021 | Unannotated protein. | Unannotated protein. | 0.670 |
CYJ10_01465 | hmgA | GCA_000974605_00119 | GCA_000974605_04482 | Unannotated protein. | Unannotated protein; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.681 |
CYJ10_01465 | hppD | GCA_000974605_00119 | GCA_000974605_03619 | Unannotated protein. | Unannotated protein. | 0.862 |
CYJ10_01465 | maiA | GCA_000974605_00119 | GCA_000974605_03467 | Unannotated protein. | Unannotated protein. | 0.782 |
CYJ10_02525 | hmgA | GCA_000974605_03468 | GCA_000974605_04482 | Unannotated protein. | Unannotated protein; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.526 |
CYJ10_02525 | maiA | GCA_000974605_03468 | GCA_000974605_03467 | Unannotated protein. | Unannotated protein. | 0.880 |
CYJ10_05545 | lysS | GCA_000974605_04058 | GCA_000974605_04316 | Unannotated protein. | Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.657 |
CYJ10_05545 | maiA | GCA_000974605_04058 | GCA_000974605_03467 | Unannotated protein. | Unannotated protein. | 0.693 |
CYJ10_05545 | rpoA | GCA_000974605_04058 | GCA_000974605_04124 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.965 |
CYJ10_05545 | rpoC | GCA_000974605_04058 | GCA_000974605_04163 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.971 |
fahA | CYJ10_00650 | GCA_000974605_04481 | GCA_000974605_02021 | Unannotated protein. | Unannotated protein. | 0.717 |
fahA | hmgA | GCA_000974605_04481 | GCA_000974605_04482 | Unannotated protein. | Unannotated protein; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.995 |
fahA | hppD | GCA_000974605_04481 | GCA_000974605_03619 | Unannotated protein. | Unannotated protein. | 0.799 |
fahA | maiA | GCA_000974605_04481 | GCA_000974605_03467 | Unannotated protein. | Unannotated protein. | 0.806 |
hmgA | CYJ10_00650 | GCA_000974605_04482 | GCA_000974605_02021 | Unannotated protein; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | Unannotated protein. | 0.936 |
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