Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYJ10_01905 | CYJ10_01920 | GCA_000974605_04202 | GCA_000974605_04199 | Unannotated protein. | Unannotated protein. | 0.959 |
CYJ10_01905 | CYJ10_02375 | GCA_000974605_04202 | GCA_000974605_03499 | Unannotated protein. | Unannotated protein. | 0.470 |
CYJ10_01905 | thiC | GCA_000974605_04202 | GCA_000974605_04203 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.806 |
CYJ10_01905 | thiD | GCA_000974605_04202 | GCA_000974605_04196 | Unannotated protein. | Unannotated protein. | 0.448 |
CYJ10_01905 | thiG | GCA_000974605_04202 | GCA_000974605_04200 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.977 |
CYJ10_01905 | thiL | GCA_000974605_04202 | GCA_000974605_04715 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.440 |
CYJ10_01905 | thiS | GCA_000974605_04202 | GCA_000974605_04201 | Unannotated protein. | Unannotated protein. | 0.962 |
CYJ10_01920 | CYJ10_01905 | GCA_000974605_04199 | GCA_000974605_04202 | Unannotated protein. | Unannotated protein. | 0.959 |
CYJ10_01920 | CYJ10_02375 | GCA_000974605_04199 | GCA_000974605_03499 | Unannotated protein. | Unannotated protein. | 0.584 |
CYJ10_01920 | guaB | GCA_000974605_04199 | GCA_000974605_02252 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.631 |
CYJ10_01920 | purL | GCA_000974605_04199 | GCA_000974605_02916 | Unannotated protein. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.553 |
CYJ10_01920 | ribB | GCA_000974605_04199 | GCA_000974605_03858 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.538 |
CYJ10_01920 | thiC | GCA_000974605_04199 | GCA_000974605_04203 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.980 |
CYJ10_01920 | thiD | GCA_000974605_04199 | GCA_000974605_04196 | Unannotated protein. | Unannotated protein. | 0.997 |
CYJ10_01920 | thiG | GCA_000974605_04199 | GCA_000974605_04200 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.998 |
CYJ10_01920 | thiL | GCA_000974605_04199 | GCA_000974605_04715 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.753 |
CYJ10_01920 | thiS | GCA_000974605_04199 | GCA_000974605_04201 | Unannotated protein. | Unannotated protein. | 0.987 |
CYJ10_02375 | CYJ10_01905 | GCA_000974605_03499 | GCA_000974605_04202 | Unannotated protein. | Unannotated protein. | 0.470 |
CYJ10_02375 | CYJ10_01920 | GCA_000974605_03499 | GCA_000974605_04199 | Unannotated protein. | Unannotated protein. | 0.584 |
CYJ10_02375 | thiC | GCA_000974605_03499 | GCA_000974605_04203 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.796 |
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