Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYJ10_32445 | CYJ10_32455 | GCA_000974605_04416 | GCA_000974605_04418 | Unannotated protein. | Unannotated protein. | 0.447 |
CYJ10_32445 | GCA_000974605_02682 | GCA_000974605_04416 | GCA_000974605_02682 | Unannotated protein. | Unannotated protein. | 0.439 |
CYJ10_32445 | flgG | GCA_000974605_04416 | GCA_000974605_03299 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.434 |
CYJ10_32445 | flgL | GCA_000974605_04416 | GCA_000974605_03304 | Unannotated protein. | Unannotated protein. | 0.440 |
CYJ10_32445 | fliE | GCA_000974605_04416 | GCA_000974605_02675 | Unannotated protein. | Unannotated protein. | 0.448 |
CYJ10_32445 | fliI | GCA_000974605_04416 | GCA_000974605_02670 | Unannotated protein. | Unannotated protein. | 0.458 |
CYJ10_32445 | lon | GCA_000974605_04416 | GCA_000974605_02931 | Unannotated protein. | Unannotated protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.493 |
CYJ10_32445 | mltG | GCA_000974605_04416 | GCA_000974605_02876 | Unannotated protein. | Unannotated protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.462 |
CYJ10_32445 | parC | GCA_000974605_04416 | GCA_000974605_04415 | Unannotated protein. | Unannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. | 0.604 |
CYJ10_32445 | parE | GCA_000974605_04416 | GCA_000974605_04417 | Unannotated protein. | Unannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. | 0.749 |
CYJ10_32455 | CYJ10_32445 | GCA_000974605_04418 | GCA_000974605_04416 | Unannotated protein. | Unannotated protein. | 0.447 |
CYJ10_32455 | parE | GCA_000974605_04418 | GCA_000974605_04417 | Unannotated protein. | Unannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. | 0.512 |
GCA_000974605_02682 | CYJ10_32445 | GCA_000974605_02682 | GCA_000974605_04416 | Unannotated protein. | Unannotated protein. | 0.439 |
GCA_000974605_02682 | flgG | GCA_000974605_02682 | GCA_000974605_03299 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.976 |
GCA_000974605_02682 | flgL | GCA_000974605_02682 | GCA_000974605_03304 | Unannotated protein. | Unannotated protein. | 0.976 |
GCA_000974605_02682 | fliE | GCA_000974605_02682 | GCA_000974605_02675 | Unannotated protein. | Unannotated protein. | 0.939 |
GCA_000974605_02682 | fliI | GCA_000974605_02682 | GCA_000974605_02670 | Unannotated protein. | Unannotated protein. | 0.961 |
GCA_000974605_02682 | parC | GCA_000974605_02682 | GCA_000974605_04415 | Unannotated protein. | Unannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. | 0.583 |
flgG | CYJ10_32445 | GCA_000974605_03299 | GCA_000974605_04416 | Unannotated protein; Belongs to the flagella basal body rod proteins family. | Unannotated protein. | 0.434 |
flgG | GCA_000974605_02682 | GCA_000974605_03299 | GCA_000974605_02682 | Unannotated protein; Belongs to the flagella basal body rod proteins family. | Unannotated protein. | 0.976 |
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