STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYJ10_22090Unannotated protein. (218 aa)    
Predicted Functional Partners:
CYJ10_22085
Unannotated protein; Belongs to the ParB family.
 
 
 0.964
CYJ10_00495
Unannotated protein; Belongs to the ParB family.
 
 
 0.823
GCA_000974605_02495
Unannotated protein.
 
 
 0.798
GCA_000974605_01835
Unannotated protein.
 
 
 0.740
CYJ10_22100
Unannotated protein.
 
     0.578
GCA_000974605_05812
Unannotated protein.
 
 
 0.575
GCA_000974605_01381
Unannotated protein.
 
 
 0.570
dnaA
Unannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.551
GCA_000974605_05773
Unannotated protein.
  
 
 0.525
GCA_000974605_05774
Unannotated protein.
  
 
 0.525
Your Current Organism:
Cupriavidus pauculus
NCBI taxonomy Id: 82633
Other names: ATCC 700817, C. pauculus, CCUG 12507, CDC E6793, CDC group IVc-2, CIP 105943, DSM 17313, JCM 11286, LMG 3244, LMG:3244, Ralstonia paucula, Wautersia paucula
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.