STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000974605_05981Unannotated protein. (887 aa)    
Predicted Functional Partners:
GCA_000974605_05980
Unannotated protein.
 
 
 0.998
CYJ10_18640
Unannotated protein; Belongs to the helicase family. UvrD subfamily.
  
 
 0.970
GCA_000974605_05979
Unannotated protein.
       0.810
GCA_000974605_05982
Unannotated protein.
       0.468
GCA_000974605_05978
Unannotated protein.
       0.406
GCA_000974605_05883
Unannotated protein.
      
 0.404
recR
Unannotated protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
     
 0.401
CYJ10_33340
Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
     
 0.401
GCA_000974605_05977
Unannotated protein.
       0.401
Your Current Organism:
Cupriavidus pauculus
NCBI taxonomy Id: 82633
Other names: ATCC 700817, C. pauculus, CCUG 12507, CDC E6793, CDC group IVc-2, CIP 105943, DSM 17313, JCM 11286, LMG 3244, LMG:3244, Ralstonia paucula, Wautersia paucula
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.