STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000974605_06107Unannotated protein. (173 aa)    
Predicted Functional Partners:
GCA_000974605_06106
Unannotated protein.
     0.993
aspT-2
Unannotated protein.
 
  
 0.914
GCA_000974605_05194
Unannotated protein.
 
  
 0.786
aspT
Unannotated protein.
 
  
 0.770
CYJ10_05365
Unannotated protein.
  
  
 0.589
CYJ10_28225
Unannotated protein.
 
 
 
 0.467
GCA_000974605_04902
Unannotated protein.
  
  
 0.465
GCA_000974605_02074
Unannotated protein.
 
     0.447
purL
Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
 
  
 0.446
CYJ10_31195
Unannotated protein.
  
     0.446
Your Current Organism:
Cupriavidus pauculus
NCBI taxonomy Id: 82633
Other names: ATCC 700817, C. pauculus, CCUG 12507, CDC E6793, CDC group IVc-2, CIP 105943, DSM 17313, JCM 11286, LMG 3244, LMG:3244, Ralstonia paucula, Wautersia paucula
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.