STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prmA(LSU ribosomal protein L11P)-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (302 aa)    
Predicted Functional Partners:
rplK
LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
 
 0.959
AFY70270.1
PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: ter:Tery_3545 16S ribosomal RNA methyltransferase RsmE; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: 16S ribosomal RNA methyltransferase RsmE; TIGRFAM: Ribosomal RNA small subunit methyltransferase E.
  
  
 0.738
AFY68372.1
KEGG: cyt:cce_3419 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.697
AFY71757.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.667
AFY69648.1
TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
    
 0.560
AFY70538.1
PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR002792:IPR010280:IPR001566; KEGG: naz:Aazo_3654 TrmA family RNA methyltransferase; PFAM: Deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; SPTR: 23S rRNA methyltransferase/RumA; TIGRFAM: 23S rRNA methyltransferase/RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
 
   
 0.530
purN
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.525
AFY70691.1
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.508
AFY68628.1
Heat shock protein DnaJ domain protein; PFAM: DnaJ domain; Tetratricopeptide repeat; InterPro IPR001623:IPR019734:IPR001440; KEGG: cyn:Cyan7425_3901 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; Tetratricopeptide TPR-1; SMART: Heat shock protein DnaJ, N-terminal; Tetratricopeptide repeat; SPTR: Heat shock protein DnaJ-like.
  
  
 0.500
AFY68629.1
Heat shock protein DnaJ domain protein; PFAM: DnaJ domain; InterPro IPR001623:IPR019734:IPR001440; KEGG: cyn:Cyan7425_3901 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; Tetratricopeptide TPR-1; SMART: Heat shock protein DnaJ, N-terminal; Tetratricopeptide repeat; SPTR: Heat shock protein DnaJ domain protein.
  
  
 0.500
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.