STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY68568.1PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: rpx:Rpdx1_2986 pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Putative uncharacterized protein. (186 aa)    
Predicted Functional Partners:
AFY70721.1
PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: tel:tll0709 hypothetical protein; PFAM: Pentapeptide repeat; SPTR: Tll0709 protein.
  
     0.775
AFY70549.1
PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: npu:Npun_R2559 pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat-containing protein.
  
     0.774
AFY68555.1
PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyh:Cyan8802_4196 pentapeptide repeat protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein.
  
     0.768
AFY68569.1
2-hydroxy-3-oxopropionate reductase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115; KEGG: cyc:PCC7424_1570 6-phosphogluconate dehydrogenase NAD-binding; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; PRIAM: 2-hydroxy-3-oxopropionate reductase; SPTR: NAD binding domain of 6-phosphogluconate dehydrogenase family.
  
    0.443
AFY68567.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: cyb:CYB_2685 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat domain protein.
       0.429
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.