STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY69025.1PFAM: Cytochrome C biogenesis protein transmembrane region; COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: amr:AM1_1810 cytochrome c biogenesis protein, thiol reduction transmembrane region, CcdA; PFAM: Cytochrome c assembly protein, transmembrane domain; SPTR: Cytochrome C biogenesis protein transmembrane region. (241 aa)    
Predicted Functional Partners:
ccsB
Cytochrome c biogenesis protein ccs1; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
 
  
 0.621
AFY70926.1
PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: amr:AM1_4403 cytochrome c-type biogenesis protein, CcsA-like protein, putative; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c-type biogenesis protein, CcsA-like protein, putative.
  
  
 0.554
ccsA
Cytochrome c biogenesis protein ccsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
  
  
 0.554
AFY70918.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; InterPro IPR013766; KEGG: gvi:gvip237 thiol:disulfide interchange protein; PFAM: Thioredoxin domain; SPTR: Thioredoxin domain protein.
  
  
 0.527
AFY70896.1
PFAM: Recombinase; InterPro IPR011109; KEGG: amr:AM1_0888 recombinase, putative; PFAM: Recombinase; SPTR: Recombinase.
   
    0.456
hemL
PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; HAMAP: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; InterPro IPR004639:IPR005814; KEGG: ava:Ava_4920 glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Glutamate-1-semialdehyde 2,1-aminomutase; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase.
  
  
 0.433
AFY69743.1
PFAM: Protein of unknown function (DUF3529); KEGG: cyj:Cyan7822_2700 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.424
psaE
Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.421
AFY68618.1
PFAM: Amino acid permease; Vitamin K epoxide reductase family; COGs: COG4243 membrane protein; InterPro IPR012932; KEGG: cyc:PCC7424_0468 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; SPTR: Putative uncharacterized protein.
     
 0.417
AFY70927.1
Hypothetical protein; PFAM: ResB-like family; KEGG: amr:AM1_4402 cytochrome c biogenesis protein, CcsB-like protein, putative; SPTR: Putative uncharacterized protein.
  
  
 0.413
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.