STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY69204.1Transposase; KEGG: npu:Npun_BF154 transposase; SPTR: Transposase. (195 aa)    
Predicted Functional Partners:
AFY69203.1
Transposase; KEGG: ter:Tery_1100 transposase; SPTR: Transposase.
 
    0.844
AFY68990.1
PFAM: Protein of unknown function (DUF2808); KEGG: amr:AM1_5203 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.605
AFY70509.1
Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: cyt:cce_2154 putative regulatory protein CII; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Putative uncharacterized protein.
  
     0.536
AFY70117.1
KEGG: ava:Ava_3631 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.482
AFY69840.1
KEGG: cyt:cce_2451 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.479
AFY71594.1
PFAM: Sulfate transporter family; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645; KEGG: amr:AM1_3196 sulfate transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulphate transporter.
  
     0.443
AFY70733.1
KEGG: ana:alr0196 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.431
psbE
Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
       0.422
AFY68698.1
KEGG: ana:all2290 hypothetical protein; SPTR: All2290 protein.
  
     0.401
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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