STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY69404.1PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: cyn:Cyan7425_1220 glycosyl transferase family 9; PFAM: Glycosyl transferase, family 9; SPTR: Glycosyl transferase family 9. (319 aa)    
Predicted Functional Partners:
AFY68904.1
rfaE bifunctional protein; PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I; COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR011611:IPR011913; KEGG: cyn:Cyan7425_1459 RfaE bifunctional protein; PFAM: Carbohydrate/purine kinase; SPTR: RfaE bifunctional protein; TIGRFAM: RfaE bifunctional protein, domain I.
 
  
 0.785
AFY68941.1
rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
 
  
 0.778
AFY71122.1
PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: bph:Bphy_3557 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 9; SPTR: Glycosyl transferase family 9.
  
     0.760
AFY70307.1
Histidinol-phosphate phosphatase family protein; PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; COGs: COG0241 Histidinol phosphatase and related phosphatase; InterPro IPR006543:IPR006549; KEGG: syp:SYNPCC7002_A1903 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase; SPTR: D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA.
 
   
 0.715
AFY69403.1
Peptidoglycan-binding domain 1 protein; PFAM: Putative peptidoglycan binding domain; InterPro IPR002477; KEGG: ter:Tery_0837 hypothetical protein; PFAM: Peptidoglycan binding-like; SPTR: Putative uncharacterized protein.
       0.572
AFY69534.1
Inorganic carbon transporter; PFAM: O-Antigen ligase; TIGRFAM: putative bicarbonate transporter, IctB family; COGs: COG3307 Lipid A core - O-antigen ligase; InterPro IPR006007:IPR007016; KEGG: cyc:PCC7424_4957 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: Putative uncharacterized protein; TIGRFAM: Inorganic carbon transporter.
  
 0.563
ndhB
NADH dehydrogenase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
    
   0.529
AFY68690.1
PFAM: Photosystem I reaction centre subunit III; InterPro IPR003666; KEGG: ppp:PHYPADRAFT_130189 hypothetical protein; PFAM: Photosystem I PsaF, reaction centre subunit III; SPTR: Photosystem I reaction center subunit III.
   
   0.523
ndhA
NADH dehydrogenase subunit H; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
   
   0.495
ndhK
NADH dehydrogenase subunit B; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration; Belongs to the complex I 20 kDa subunit family.
    
   0.491
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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