rnhB protein (Pseudanabaena sp. PCC7367) - STRING interaction network

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rnhB

RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (241 aa)

Predicted Functional Partners:

AFY69755.1

0.889

AFY68350.1

0.812

AFY69821.1

0.710

acpP

0.653

AFY70621.1

0.638

AFY68616.1

0.623

polA

0.622

AFY68824.1

0.604

AFY71854.1

0.602

AFY70585.1

0.578

Your Current Organism:

Pseudanabaena sp. PCC7367

NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFY68350.1	AFY68616.1	Pse7367_0030	Pse7367_0302	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.	KEGG: npu:Npun_F3759 putative lipid-A-disaccharide synthase; SPTR: Putative lipid-A-disaccharide synthase.	0.960
AFY68350.1	AFY70585.1	Pse7367_0030	Pse7367_2323	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.	acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.	0.949
AFY68350.1	rnhB	Pse7367_0030	Pse7367_1166	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.	RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.812
AFY68616.1	AFY68350.1	Pse7367_0302	Pse7367_0030	KEGG: npu:Npun_F3759 putative lipid-A-disaccharide synthase; SPTR: Putative lipid-A-disaccharide synthase.	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.	0.960
AFY68616.1	AFY70585.1	Pse7367_0302	Pse7367_2323	KEGG: npu:Npun_F3759 putative lipid-A-disaccharide synthase; SPTR: Putative lipid-A-disaccharide synthase.	acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.	0.854
AFY68616.1	rnhB	Pse7367_0302	Pse7367_1166	KEGG: npu:Npun_F3759 putative lipid-A-disaccharide synthase; SPTR: Putative lipid-A-disaccharide synthase.	RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.623
AFY68824.1	AFY71854.1	Pse7367_0516	Pse7367_3621	PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; COGs: COG0681 Signal peptidase I; InterPro IPR019759:IPR000223; KEGG: cya:CYA_2275 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; Belongs to the peptidase S26 family.	PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; COGs: COG0681 Signal peptidase I; InterPro IPR000223:IPR019759; KEGG: cyb:CYB_0452 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; Belongs to the peptidase S26 family.	0.907
AFY68824.1	rnhB	Pse7367_0516	Pse7367_1166	PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; COGs: COG0681 Signal peptidase I; InterPro IPR019759:IPR000223; KEGG: cya:CYA_2275 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; Belongs to the peptidase S26 family.	RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.604
AFY69755.1	AFY70621.1	Pse7367_1464	Pse7367_2360	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR014001:IPR001650:IPR011545:IPR004589; KEGG: cyh:Cyan8802_4440 ATP-dependent DNA helicase, RecQ family; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: DNA helicase, ATP-dependent, RecQ type.	0.727
AFY69755.1	polA	Pse7367_1464	Pse7367_1859	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.999
AFY69755.1	rnhB	Pse7367_1464	Pse7367_1166	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.889
AFY69821.1	AFY70621.1	Pse7367_1532	Pse7367_2360	Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR014001:IPR001650:IPR011545:IPR004589; KEGG: cyh:Cyan8802_4440 ATP-dependent DNA helicase, RecQ family; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: DNA helicase, ATP-dependent, RecQ type.	0.445
AFY69821.1	polA	Pse7367_1532	Pse7367_1859	Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.524
AFY69821.1	rnhB	Pse7367_1532	Pse7367_1166	Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.710
AFY70585.1	AFY68350.1	Pse7367_2323	Pse7367_0030	acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.	0.949
AFY70585.1	AFY68616.1	Pse7367_2323	Pse7367_0302	acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.	KEGG: npu:Npun_F3759 putative lipid-A-disaccharide synthase; SPTR: Putative lipid-A-disaccharide synthase.	0.854
AFY70585.1	rnhB	Pse7367_2323	Pse7367_1166	acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.	RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.578
AFY70621.1	AFY69755.1	Pse7367_2360	Pse7367_1464	ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR014001:IPR001650:IPR011545:IPR004589; KEGG: cyh:Cyan8802_4440 ATP-dependent DNA helicase, RecQ family; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: DNA helicase, ATP-dependent, RecQ type.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.727
AFY70621.1	AFY69821.1	Pse7367_2360	Pse7367_1532	ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR014001:IPR001650:IPR011545:IPR004589; KEGG: cyh:Cyan8802_4440 ATP-dependent DNA helicase, RecQ family; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: DNA helicase, ATP-dependent, RecQ type.	Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.445
AFY70621.1	polA	Pse7367_2360	Pse7367_1859	ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR014001:IPR001650:IPR011545:IPR004589; KEGG: cyh:Cyan8802_4440 ATP-dependent DNA helicase, RecQ family; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: DNA helicase, ATP-dependent, RecQ type.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.984