STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY69468.1ABC-1 domain-containing protein; PFAM: Lipopolysaccharide core biosynthesis protein (WaaY); ABC1 family; COGs: COG0661 unusual protein kinase; InterPro IPR004147; KEGG: cyj:Cyan7822_0630 ABC-1 domain-containing protein; PFAM: ABC-1; SPTR: ABC-1 domain protein. (688 aa)    
Predicted Functional Partners:
AFY69469.1
MgtC/SapB transporter; PFAM: MgtC family; COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: ava:Ava_3389 MgtC/SapB transporter; PFAM: MgtC/SapB transporter; SPTR: MgtC/SapB transporter.
       0.727
cbiD
cobalt-precorrin-6A synthase (deacetylating); Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
       0.526
AFY69467.1
PFAM: Tetratricopeptide repeat; Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173:IPR001440:IPR019734; KEGG: amr:AM1_0991 TPR repeat-containing glycosyl transferase; PFAM: Glycosyl transferase, family 2; Tetratricopeptide TPR-1; SPTR: Glycosyl transferase, family 2:TPR repeat.
       0.486
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.