STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY69595.1GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: mac:MA1158 acetyltransferase (GNAT) family protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase (GNAT) family protein. (177 aa)    
Predicted Functional Partners:
AFY71031.1
Forkhead-associated protein; PFAM: FHA domain; InterPro IPR000253; KEGG: ava:Ava_0821 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; SPTR: Putative uncharacterized protein.
  
  
 0.659
rnc
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.474
rnc-2
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.474
AFY69199.1
Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR003135:IPR013221:IPR004101:IPR011810; KEGG: cyn:Cyan7425_4852 cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; Mur ligase, C-terminal; PRIAM: Cyanophycin synthase (L-aspartate-adding); SPTR: Cyanophycin synthetase; TIGRFAM: Cyanophycin synthetase.
 
     0.452
AFY69594.1
PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; COGs: COG1505 Serine protease of the peptidase family S9A; InterPro IPR004106:IPR001375; KEGG: cyc:PCC7424_0746 prolyl oligopeptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Prolyl oligopeptidase; SPTR: Prolyl oligopeptidase.
       0.403
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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