STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY70100.1PFAM: yiaA/B two helix domain; COGs: COG4298 conserved hypothetical protein; InterPro IPR008024; KEGG: ava:Ava_2648 YiaAB two helix; PFAM: YiaAB two helix; SPTR: Putative uncharacterized protein. (94 aa)    
Predicted Functional Partners:
AFY69932.1
KEGG: syp:SYNPCC7002_A0114 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.602
AFY71087.1
PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: npu:Npun_R1136 hypothetical protein; PFAM: Domain of unknown function DUF58; SPTR: Putative uncharacterized protein.
  
     0.518
AFY69511.1
Hypothetical protein; PFAM: NACHT domain; COGs: COG5635 NTPase (NACHT family); KEGG: amr:AM1_4123 signal transduction protein; SPTR: Signal transduction protein with Nacht domain, putative.
  
     0.488
AFY70099.1
Hypothetical protein.
       0.455
AFY71833.1
PFAM: NACHT domain; COGs: COG5635 NTPase (NACHT family); KEGG: amr:AM1_4123 signal transduction protein; SPTR: NACHT domain family.
  
     0.448
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.