STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY70214.1KEGG: cyn:Cyan7425_4101 protein of unknown function DUF323; SPTR: Putative uncharacterized protein. (298 aa)    
Predicted Functional Partners:
AFY70215.1
Polynucleotide adenylyltransferase region; PFAM: Poly A polymerase head domain; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646; KEGG: cyc:PCC7424_2388 polynucleotide adenylyltransferase region; PFAM: Poly A polymerase, head domain; SPTR: Polynucleotide adenylyltransferase region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.737
AFY70216.1
PFAM: Peptidase family M50; COGs: COG1994 Zn-dependent protease; InterPro IPR008915:IPR000644; KEGG: ava:Ava_1797 peptidase M50; PFAM: Peptidase M50; Cystathionine beta-synthase, core; SPTR: Peptidase M50; Belongs to the peptidase M50B family.
       0.441
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.