STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY70280.1Hypothetical protein; KEGG: ehi:EHI_021260 villidin; SPTR: Villidin, putative. (189 aa)    
Predicted Functional Partners:
AFY70124.1
Cell division protein FtsX; PFAM: Predicted permease; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: ava:Ava_0279 cell division protein FtsX; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.712
AFY69193.1
PFAM: Glycosyltransferase family 9 (heptosyltransferase); Glycosyl transferases group 1; Tetratricopeptide repeat; COGs: COG3063 Tfp pilus assembly protein PilF; InterProIPR013105:IPR001440:IPR002201:IPR001296:IPR 019734:IPR006597; KEGG: ter:Tery_0481 TPR repeat-containing protein; PFAM: Glycosyl transferase, family 9; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; Glycosyl transferase, group 1; SMART: Tetratricopeptide repeat; Sel1-like; SPTR: TPR repeat.
  
 
 0.546
AFY70575.1
PFAM: Tetratricopeptide repeat; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734:IPR013105:IPR001440; KEGG: amr:AM1_0600 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide repeat family.
  
 
 0.448
AFY71655.1
PFAM: Peptidase family M23; LysM domain; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR002482:IPR018392:IPR016047; KEGG: syn:slr0993 lipoprotein NlpD; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: M23 peptidase domain protein.
     
 0.422
AFY70279.1
PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: npu:Npun_R4124 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2.
       0.421
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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