STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrA-3Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (228 aa)    
Predicted Functional Partners:
msrB
PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; HAMAP: Methionine sulphoxide reductase B; InterPro IPR002579; KEGG: cyc:PCC7424_3026 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrB; TIGRFAM: Methionine sulphoxide reductase B.
 
 0.984
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.807
AFY68842.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; InterPro IPR013766; KEGG: cyn:Cyan7425_1263 thioredoxin domain protein; PFAM: Thioredoxin domain; SPTR: Thioredoxin domain-containing protein.
    
 
 0.604
AFY70918.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; InterPro IPR013766; KEGG: gvi:gvip237 thiol:disulfide interchange protein; PFAM: Thioredoxin domain; SPTR: Thioredoxin domain protein.
   
 0.595
AFY70878.1
KEGG: amr:AM1_4145 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 0.553
AFY71800.1
KEGG: cyn:Cyan7425_1854 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 0.553
AFY69301.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.460
AFY69264.1
PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: IMP dehydrogenase family protein; COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR001093:IPR005992; KEGG: npu:Npun_R5588 inosine 5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; SPTR: IMP dehydrogenase family protein; TIGRFAM: IMP dehydrogenase-related 2.
     
 0.457
AFY70388.1
COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000073; KEGG: mar:MAE_08870 alpha/beta hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein.
       0.427
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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