STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY70689.1PFAM: HNH endonuclease; COGs: COG1403 Restriction endonuclease; InterPro IPR003615:IPR002711; KEGG: ava:Ava_0389 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease. (165 aa)    
Predicted Functional Partners:
AFY71044.1
KEGG: ana:all3418 hypothetical protein; SPTR: All3418 protein.
  
     0.469
AFY70691.1
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.464
AFY70690.1
Cyclomaltodextrin glucanotransferase; PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: cyj:Cyan7822_1636 alpha amylase catalytic domain-containing protein; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Cyclomaltodextrin glucanotransferase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Alpha amylase catalytic region.
       0.461
AFY71293.1
PFAM: Peptidase family M50; InterPro IPR008915; KEGG: npu:Npun_F6063 peptidase M50; PFAM: Peptidase M50; SPTR: Peptidase M50.
  
     0.400
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.