STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY70786.1PFAM: FAD dependent oxidoreductase; TIGRFAM: geranylgeranyl reductase family; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076:IPR011777; KEGG: amr:AM1_5508 geranylgeranyl reductase family protein; PFAM: FAD dependent oxidoreductase; SPTR: Geranylgeranyl reductase family protein; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic. (377 aa)    
Predicted Functional Partners:
AFY69515.1
Chlorophyll synthase; PFAM: UbiA prenyltransferase family; TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; chlorophyll synthase, ChlG; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR011799:IPR006372; KEGG: cyj:Cyan7822_3054 bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; PRIAM: Chlorophyll synthase; SPTR: Bacteriochlorophyll/chlorophyll synthetase; TIGRFAM: Chlorophyll synthase, ChlG; Bacteriochlorophyll/chlorophyll synthetase.
 
  
 0.639
AFY69711.1
Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: cyc:PCC7424_3174 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Beta-lactamase domain protein.
 
    0.571
AFY70030.1
PFAM: Protein of unknown function (DUF1232); InterPro IPR010652; KEGG: ter:Tery_4803 hypothetical protein; PFAM: Protein of unknown function DUF1232; SPTR: Putative uncharacterized protein.
  
     0.527
AFY70787.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR013105:IPR019734; KEGG: mar:MAE_58050 tetratricopeptide TPR_2; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2.
       0.523
AFY70788.1
KEGG: npu:Npun_F6456 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.523
AFY70988.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.522
AFY69555.1
PFAM: Magnesium-protoporphyrin IX methyltransferase C-terminus; TIGRFAM: magnesium protoporphyrin O-methyltransferase; COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR010251:IPR010940; KEGG: cyt:cce_0315 Mg-protoporphyrin IX methyl transferase; PFAM: Magnesium-protoporphyrin IX methyltransferase, C-terminal; PRIAM: Magnesium protoporphyrin IX methyltransferase; SPTR: Magnesium-protoporphyrin O-methyltransferase; TIGRFAM: Magnesium protoporphyrin O-methyltransferase.
  
  
 0.516
chlB
Ferredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
  
  
 0.503
AFY70789.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: syp:SYNPCC7002_A1755 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
       0.497
chlN
Ferredoxin protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
 
  
 0.473
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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