STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY71138.1PFAM: Tetratricopeptide repeat; COGs: COG4700 Uncharacterized protein containing a divergent form of TPR repeats; InterPro IPR001440:IPR019734; KEGG: amr:AM1_0607 TPR domain-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: TPR domain protein, putative. (249 aa)    
Predicted Functional Partners:
AFY71139.1
PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyn:Cyan7425_5254 pentapeptide repeat protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein.
       0.671
AFY71137.1
PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: cyt:cce_2731 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Methyltransferase type 11; PRIAM: Tocopherol O-methyltransferase; SPTR: Putative uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
       0.458
AFY71140.1
Protein of unknown function DUF129; PFAM: F420-0:Gamma-glutamyl ligase; InterPro IPR002847; KEGG: ter:Tery_4381 hypothetical protein; PFAM: F420-0 gamma-glutamyl ligase-related; SPTR: Putative uncharacterized protein.
       0.420
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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