STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY71282.1PFAM: Radical SAM superfamily; B12 binding domain; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006158:IPR007197:IPR006638; KEGG: cyt:cce_1282 hypothetical protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein. (520 aa)    
Predicted Functional Partners:
AFY69150.1
4-vinyl reductase 4VR; PFAM: V4R domain; InterPro IPR004096; KEGG: tel:tlr2301 hypothetical protein; PFAM: 4-vinyl reductase, 4VR; SPTR: Putative uncharacterized protein.
  
  
 0.530
AFY69153.1
4-vinyl reductase 4VR; PFAM: V4R domain; COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: cyn:Cyan7425_0677 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase, 4VR; SPTR: 4-vinyl reductase 4VR.
  
  
 0.530
AFY69029.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR022488:IPR022486; KEGG: mgm:Mmc1_0146 hypothetical protein; PFAM: Polyphosphate kinase-2-related; SPTR: Polyphosphate kinase 2 superfamily; TIGRFAM: Polyphosphate kinase 2, PA0141.
   
    0.442
AFY71485.1
Polyphosphate:AMP phosphotransferase; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR022300:IPR022488; KEGG: ava:Ava_3133 polyphosphate:AMP phosphotransferase; PFAM: Polyphosphate kinase-2-related; SPTR: Polyphosphate:AMP phosphotransferase; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2.
   
    0.442
AFY71283.1
Hypothetical protein.
       0.434
AFY71281.1
Protein of unknown function DUF2141; PFAM: Uncharacterized protein conserved in bacteria (DUF2141); COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: npu:Npun_F4662 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: Putative uncharacterized protein.
       0.425
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.