STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY71447.1PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Localisation of periplasmic protein complexes; TIGRFAM: TonB-dependent siderophore receptor; COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR010105:IPR012910:IPR000531; KEGG: amr:AM1_A0184 TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor. (850 aa)    
Predicted Functional Partners:
AFY71448.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: cyn:Cyan7425_2420 TonB family protein; PFAM: TonB, C-terminal; SPTR: TonB family protein; TIGRFAM: TonB, C-terminal.
 
 
 0.999
AFY71446.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: syn:sll1202 hypothetical protein; PFAM: Periplasmic binding protein; SPTR: Sll1202 protein.
 
  
 0.912
AFY70448.1
KEGG: ava:Ava_4816 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.910
AFY71453.1
Iron-chelate-transporting ATPase; PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: amr:AM1_A0161 iron(III) dicitrate ABC transporter; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Probable iron(III) dicitrate ABC transporter.
 
  
 0.757
AFY71456.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: amr:AM1_3397 iron(III) dicitrate ABC transporter, periplasmic iron(III) dicitrate-binding protein; PFAM: Periplasmic binding protein; SPTR: Iron(III) dicitrate ABC transporter, periplasmic iron(III) dicitrate-binding protein.
 
  
 0.746
AFY71450.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: amr:AM1_A0164 biopolymer transport protein ExbD/TolR, putative; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR, putative; TC 2.C.1.1.1.
 
  
 0.707
AFY70759.1
PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein; COGs: COG0672 High-affinity Fe2+/Pb2+ permease; InterPro IPR004923; KEGG: ava:Ava_1763 iron permease FTR1; PFAM: Iron permease FTR1; SPTR: Putative uncharacterized protein.
  
  
 0.669
AFY71449.1
PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: syp:SYNPCC7002_G0137 MotA/TolQ/ExbB proton channel family protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1.
 
  
 0.652
AFY71455.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: syp:SYNPCC7002_G0007 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family.
  
   
 0.648
AFY71452.1
ABC-type transporter, integral membrane subunit; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: amr:AM1_A0162 iron(III) dicitrate ABC transporter, permease protein; PFAM: ABC transporter permease protein; SPTR: Iron(III) dicitrate ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.565
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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