STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY71616.1TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: npu:Npun_F5842 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD. (463 aa)    
Predicted Functional Partners:
AFY71617.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: ava:Ava_2544 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.887
AFY69706.1
PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: npu:Npun_R2885 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein.
 
 
 0.783
AFY71394.1
KEGG: npu:Npun_R0165 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.646
AFY71662.1
PFAM: Subtilase family; InterPro IPR000209; KEGG: npu:Npun_R1540 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
   
 0.618
AFY68884.1
KEGG: cyt:cce_2950 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.601
AFY70825.1
TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143:IPR000089; KEGG: ana:all3144 hypothetical protein; PFAM: Secretion protein HlyD; Biotin/lipoyl attachment; SPTR: All3144 protein; TIGRFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.547
AFY68913.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: tel:tll1383 ABC transporter permease protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC transporter permease protein.
 
  
 0.544
AFY70889.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: ABC transporter transmembrane region; ABC transporter; Cyclic nucleotide-binding domain; TIGRFAM: type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR000595:IPR001140:IPR003439:IPR003593:IPR 010132; KEGG: ana:all2676 toxin secretion ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; Cyclic nucleotide-binding domain; PRIAM: Peptide-transporti [...]
  
 
 0.524
AFY71555.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: ABC transporter; ABC transporter transmembrane region; Cyclic nucleotide-binding domain; TIGRFAM: type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR000595:IPR001140:IPR003439:IPR003593; KEGG: ter:Tery_1352 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; Cyclic nucleotide-binding domain; PRIAM: Peptide-tran [...]
  
 
 0.524
AFY70798.1
Peptidase domain protein; InterPro IPR007280; KEGG: mar:MAE_30230 peptidase; PFAM: Peptidase, C-terminal, archaeal/bacterial; SPTR: Bacterial pre-peptidase C-terminal domain family.
  
     0.512
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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