STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY71675.1KEGG: cyn:Cyan7425_5266 putative ribonuclease P; SPTR: Putative uncharacterized protein. (135 aa)    
Predicted Functional Partners:
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.790
AFY70667.1
PFAM: Protein of unknown function (DUF1092); InterPro IPR009472; KEGG: cyn:Cyan7425_0781 protein of unknown function DUF1092; PFAM: Protein of unknown function DUF1092; SPTR: Putative uncharacterized protein.
  
     0.774
AFY70703.1
PFAM: Domain of unknown function (DUF1995); InterPro IPR018962; KEGG: cyn:Cyan7425_2561 hypothetical protein; PFAM: Domain of unknown function DUF1995; SPTR: Putative uncharacterized protein.
  
     0.774
AFY70858.1
PFAM: Protein of unknown function (DUF3464); KEGG: syp:SYNPCC7002_A1824 hypothetical protein; SPTR: Hypothetical ABC-type Co2+ transport system permease component.
  
     0.774
thf1
Protein thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.774
AFY69335.1
PFAM: Protein of unknown function (DUF2930); KEGG: tel:tll0685 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFY70752.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: ava:Ava_1843 photosystem II manganese-stabilizing protein PsbO; PFAM: Photosystem II PsbO, manganese-stabilising; SPTR: Photosystem II manganese-stabilizing protein PsbO.
  
     0.773
AFY69743.1
PFAM: Protein of unknown function (DUF3529); KEGG: cyj:Cyan7822_2700 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
AFY69157.1
PFAM: PsaD; InterPro IPR003685; KEGG: syf:Synpcc7942_1002 photosystem I reaction center subunit II; PFAM: Photosystem I PsaD; SPTR: Photosystem I reaction center subunit II.
  
     0.771
AFY71151.1
PFAM: Protein of unknown function (DUF3353); KEGG: ava:Ava_4913 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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