STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY71808.1Peptidoglycan-binding domain 1 protein; PFAM: Putative peptidoglycan binding domain; COGs: COG3409 Putative peptidoglycan-binding domain-containing protein; InterPro IPR002477; KEGG: dsy:DSY1780 hypothetical protein; PFAM: Peptidoglycan binding-like; SPTR: Putative uncharacterized protein. (210 aa)    
Predicted Functional Partners:
AFY69403.1
Peptidoglycan-binding domain 1 protein; PFAM: Putative peptidoglycan binding domain; InterPro IPR002477; KEGG: ter:Tery_0837 hypothetical protein; PFAM: Peptidoglycan binding-like; SPTR: Putative uncharacterized protein.
  
     0.677
AFY71809.1
KEGG: dly:Dehly_0079 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.556
AFY71810.1
DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; COGs: COG0863 DNA modification methylase; InterPro IPR002941; KEGG: cts:Ctha_1575 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6; SPTR: DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family.
       0.427
Your Current Organism:
Pseudanabaena sp. PCC7367
NCBI taxonomy Id: 82654
Other names: Calotaxis gracile PCC 7367, P. sp. PCC 7367, Pseudanabaena PCC7367, Pseudanabaena sp. PCC 7367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.