STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ01717.1CubicO group peptidase, beta-lactamase class C family. (339 aa)    
Predicted Functional Partners:
SFQ06264.1
beta-N-acetylhexosaminidase.
 
 0.980
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.906
SFQ26469.1
Lysophospholipase L1.
 
   
 0.892
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.890
SFQ30744.1
D-Ala-D-Ala carboxypeptidase A. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family.
     
 0.879
SFQ01705.1
Predicted acetyltransferase.
 
     0.744
SFQ04629.1
S-formylglutathione hydrolase FrmB.
    
 0.608
SFQ01735.1
Mannose-6-phosphate isomerase, type 1.
       0.581
SFQ28568.1
Beta-lactamase class A.
    
 0.531
SFQ34923.1
Hypothetical protein.
     
 0.414
Your Current Organism:
Desemzia incerta
NCBI taxonomy Id: 82801
Other names: ATCC 8363, Bacterium incertum, Brevibacterium incertum, CCUG 38799, CIP 104227, CIP 106501, D. incerta, DSM 20581, IFO 12145, NBRC 12145, NCIB 9892, NCIB:9892, NCIMB 9892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.