STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ04836.1Amino acid ABC transporter substrate-binding protein, PAAT family. (293 aa)    
Predicted Functional Partners:
SFQ04815.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.998
SFQ04789.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.982
SFQ04760.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.929
SFQ38023.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.858
SFQ44997.1
Amino acid ABC transporter membrane protein, PAAT family.
 
 0.791
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.754
argH
Argininosuccinate lyase.
  
  
 0.741
SFQ45008.1
Cystine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  
  
  0.684
SFQ39008.1
Putative glutamine transport system permease protein.
 
 0.663
SFQ35608.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.655
Your Current Organism:
Desemzia incerta
NCBI taxonomy Id: 82801
Other names: ATCC 8363, Bacterium incertum, Brevibacterium incertum, CCUG 38799, CIP 104227, CIP 106501, D. incerta, DSM 20581, IFO 12145, NBRC 12145, NCIB 9892, NCIB:9892, NCIMB 9892
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