STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ06139.1Protein of unknown function. (74 aa)    
Predicted Functional Partners:
SFQ06161.1
Hypothetical protein.
       0.662
SFQ06117.1
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein.
       0.544
SFQ00263.1
Putative phosphoesterase.
  
     0.482
SFQ21357.1
Uncharacterized conserved protein, DUF697 family.
  
     0.442
SFQ23795.1
V/A-type H+-transporting ATPase subunit E.
  
     0.413
SFQ06179.1
Heat induced stress protein YflT.
       0.412
Your Current Organism:
Desemzia incerta
NCBI taxonomy Id: 82801
Other names: ATCC 8363, Bacterium incertum, Brevibacterium incertum, CCUG 38799, CIP 104227, CIP 106501, D. incerta, DSM 20581, IFO 12145, NBRC 12145, NCIB 9892, NCIB:9892, NCIMB 9892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.