STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ15287.1Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. (486 aa)    
Predicted Functional Partners:
SFQ03211.1
Methyl-accepting chemotaxis protein.
    
 0.866
SFP99946.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
   
 
  0.863
SFQ33501.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.853
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.850
SFP96341.1
Flagellar motor switch protein FliN/FliY.
   
   0.847
SFQ06117.1
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein.
  
 
 0.766
SFQ16004.1
Flagellum-specific peptidoglycan hydrolase FlgJ.
  
 
 0.749
SFQ30744.1
D-Ala-D-Ala carboxypeptidase A. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family.
  
 
 0.700
SFQ33520.1
Cell wall-associated hydrolase, NlpC family.
 
  
0.700
SFQ22549.1
LysM repeat-containing protein.
  
 
 0.699
Your Current Organism:
Desemzia incerta
NCBI taxonomy Id: 82801
Other names: ATCC 8363, Bacterium incertum, Brevibacterium incertum, CCUG 38799, CIP 104227, CIP 106501, D. incerta, DSM 20581, IFO 12145, NBRC 12145, NCIB 9892, NCIB:9892, NCIMB 9892
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