STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ23319.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (319 aa)    
Predicted Functional Partners:
SFQ23279.1
Peptide/nickel transport system permease protein.
 
 0.998
SFP99321.1
Peptide/nickel transport system permease protein.
 
 0.993
SFQ38507.1
Peptide/nickel transport system permease protein.
 
 0.983
SFQ23297.1
Peptide/nickel transport system permease protein.
 
 0.982
SFQ23255.1
Peptide/nickel transport system substrate-binding protein.
 
 
 0.979
SFQ23337.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.975
SFQ28951.1
Oligopeptide transport system permease protein.
 
 0.971
SFP95792.1
Oligopeptide transport system permease protein.
 
 0.970
SFP99333.1
Peptide/nickel transport system permease protein.
 
 0.943
SFQ38517.1
Peptide/nickel transport system permease protein.
 
 0.910
Your Current Organism:
Desemzia incerta
NCBI taxonomy Id: 82801
Other names: ATCC 8363, Bacterium incertum, Brevibacterium incertum, CCUG 38799, CIP 104227, CIP 106501, D. incerta, DSM 20581, IFO 12145, NBRC 12145, NCIB 9892, NCIB:9892, NCIMB 9892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.