Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFQ27619.1 | SFQ27630.1 | SAMN04488506_1227 | SAMN04488506_1228 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | MazG nucleotide pyrophosphohydrolase domain-containing protein. | 0.881 |
| SFQ27619.1 | SFQ27644.1 | SAMN04488506_1227 | SAMN04488506_1229 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Polysaccharide transporter, PST family. | 0.824 |
| SFQ27619.1 | mfd | SAMN04488506_1227 | SAMN04488506_1230 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.760 |
| SFQ27619.1 | pth | SAMN04488506_1227 | SAMN04488506_1231 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.697 |
| SFQ27630.1 | SFQ27619.1 | SAMN04488506_1228 | SAMN04488506_1227 | MazG nucleotide pyrophosphohydrolase domain-containing protein. | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | 0.881 |
| SFQ27630.1 | SFQ27644.1 | SAMN04488506_1228 | SAMN04488506_1229 | MazG nucleotide pyrophosphohydrolase domain-containing protein. | Polysaccharide transporter, PST family. | 0.794 |
| SFQ27630.1 | guaA | SAMN04488506_1228 | SAMN04488506_0202 | MazG nucleotide pyrophosphohydrolase domain-containing protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.915 |
| SFQ27630.1 | mfd | SAMN04488506_1228 | SAMN04488506_1230 | MazG nucleotide pyrophosphohydrolase domain-containing protein. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.770 |
| SFQ27630.1 | polA | SAMN04488506_1228 | SAMN04488506_0675 | MazG nucleotide pyrophosphohydrolase domain-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.451 |
| SFQ27630.1 | pth | SAMN04488506_1228 | SAMN04488506_1231 | MazG nucleotide pyrophosphohydrolase domain-containing protein. | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.696 |
| SFQ27644.1 | SFQ27619.1 | SAMN04488506_1229 | SAMN04488506_1227 | Polysaccharide transporter, PST family. | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | 0.824 |
| SFQ27644.1 | SFQ27630.1 | SAMN04488506_1229 | SAMN04488506_1228 | Polysaccharide transporter, PST family. | MazG nucleotide pyrophosphohydrolase domain-containing protein. | 0.794 |
| SFQ27644.1 | mfd | SAMN04488506_1229 | SAMN04488506_1230 | Polysaccharide transporter, PST family. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.734 |
| SFQ27644.1 | pth | SAMN04488506_1229 | SAMN04488506_1231 | Polysaccharide transporter, PST family. | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.646 |
| dsdA | pth | SAMN04488506_0532 | SAMN04488506_1231 | D-serine ammonia-lyase; Belongs to the serine/threonine dehydratase family. DsdA subfamily. | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.866 |
| guaA | SFQ27630.1 | SAMN04488506_0202 | SAMN04488506_1228 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | MazG nucleotide pyrophosphohydrolase domain-containing protein. | 0.915 |
| guaA | polA | SAMN04488506_0202 | SAMN04488506_0675 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.671 |
| guaA | pth | SAMN04488506_0202 | SAMN04488506_1231 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.621 |
| guaA | tilS | SAMN04488506_0202 | SAMN04488506_2171 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.962 |
| guaA | ychF | SAMN04488506_0202 | SAMN04488506_1411 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.817 |
page 1 of 3