STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ35327.1Putative glutamine amidotransferase. (247 aa)    
Predicted Functional Partners:
SFQ43290.1
L-glutamine synthetase.
  
 
 0.687
SFQ43311.1
Glutamine synthetase.
  
 
 0.687
SFQ38039.1
DNA-binding transcriptional regulator, FrmR family.
   
    0.558
SFQ00690.1
Arginase family protein.
    
 0.544
SFQ44840.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.535
SFQ45571.1
Competence protein ComEC.
     
 0.461
SFQ15728.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
 
 
 0.445
SFQ41102.1
Succinate semialdehyde dehydrogenase.
 
 
 0.445
SFQ35271.1
Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
       0.431
SFQ35293.1
Protein involved in ribonucleotide reduction; Belongs to the NrdI family.
       0.431
Your Current Organism:
Desemzia incerta
NCBI taxonomy Id: 82801
Other names: ATCC 8363, Bacterium incertum, Brevibacterium incertum, CCUG 38799, CIP 104227, CIP 106501, D. incerta, DSM 20581, IFO 12145, NBRC 12145, NCIB 9892, NCIB:9892, NCIMB 9892
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