STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ37950.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (295 aa)    
Predicted Functional Partners:
SFQ37930.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.973
SFQ37912.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 0.961
SFQ40294.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.958
SFQ28127.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.955
SFQ28013.1
lactose/L-arabinose transport system permease protein.
 
  0.942
SFQ44716.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.915
SFQ06601.1
Maltooligosaccharide ABC transporter membrane protein.
 0.908
SFP98061.1
Multiple sugar transport system permease protein.
 
  0.906
SFQ43735.1
Multiple sugar transport system substrate-binding protein.
 0.905
SFQ43756.1
Multiple sugar transport system permease protein.
 
  0.904
Your Current Organism:
Desemzia incerta
NCBI taxonomy Id: 82801
Other names: ATCC 8363, Bacterium incertum, Brevibacterium incertum, CCUG 38799, CIP 104227, CIP 106501, D. incerta, DSM 20581, IFO 12145, NBRC 12145, NCIB 9892, NCIB:9892, NCIMB 9892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.