STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ38646.1Transcriptional regulator, RpiR family. (288 aa)    
Predicted Functional Partners:
SFP99426.1
PTS system beta-glucoside-specific IIA component, Glc family /PTS system beta-glucoside-specific IIB component, Glc family /PTS system beta-glucoside-specific IIC component, Glc family.
  
 
 0.904
SFQ23150.1
PTS system, maltose and glucose-specific IIC component.
  
 
 0.904
SFQ26834.1
PTS system beta-glucoside-specific IIA component, Glc family /PTS system beta-glucoside-specific IIB component, Glc family /PTS system beta-glucoside-specific IIC component, Glc family.
  
 
 0.904
SFQ38398.1
PTS system IIA component, Glc family /PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
 
 0.904
SFQ46621.1
PTS system, beta-glucosides-specific IIC component.
  
 
 0.904
SFQ04527.1
Transcriptional regulator, RpiR family.
  
     0.744
SFQ38633.1
Predicted dehydrogenase.
  
     0.553
SFQ38623.1
Predicted dehydrogenase.
  
     0.528
SFP95330.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
 
 0.469
SFP95437.1
PTS system maltose-specific IIB component, Glc family /PTS system maltose-specific IIC component, Glc family.
  
 
 0.469
Your Current Organism:
Desemzia incerta
NCBI taxonomy Id: 82801
Other names: ATCC 8363, Bacterium incertum, Brevibacterium incertum, CCUG 38799, CIP 104227, CIP 106501, D. incerta, DSM 20581, IFO 12145, NBRC 12145, NCIB 9892, NCIB:9892, NCIMB 9892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.