STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF23369.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
SHF24922.1
Protein of unknown function.
  
     0.726
SHF85080.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
   
 
  0.710
SHF35072.1
Cystine transport system substrate-binding protein.
 
     0.670
SHF23397.1
DNA-binding regulatory protein, YebC/PmpR family.
       0.627
SHF92327.1
CAP-associated N-terminal.
  
     0.607
SHF23337.1
Oligoendopeptidase, pepF/M3 family.
       0.594
SHF92264.1
Uncharacterized protein YlaN, UPF0358 family; Belongs to the UPF0358 family.
  
     0.559
SHF61120.1
Hypothetical protein.
  
     0.513
SHF43657.1
Protein of unknown function.
  
     0.512
SHF85113.1
Vitamin B12 dependent methionine synthase, activation domain.
   
 
  0.510
Your Current Organism:
Trichococcus flocculiformis
NCBI taxonomy Id: 82803
Other names: ATCC 51221, DSM 2094, T. flocculiformis, strain Echt
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.